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| Status |
Public on Feb 02, 2015 |
| Title |
Microarray analysis of Rhodobacter sphaeroides CceR and AkgR deletion strains |
| Platform organism |
Cereibacter sphaeroides 2.4.1 |
| Sample organism |
Cereibacter sphaeroides |
| Experiment type |
Expression profiling by array
|
| Summary |
To gain a better understanding of the transcription factors that regulate central carbon metabolism in Rhodobacter sphaeroides global gene expression analysis was used to determine genes under the regulatory influence of 2 transcription factors: CcmR (RSP_1663) and AkgR (RSP_0981) both predicted to be involved in the regulation of central carbon and energy metabolism.
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| Overall design |
Microarray analysis conducted for deletion strains of 2 transcription factors known or predicted to be involved in the regulation of central carbon metabolism in Rhodobacter sphaeroides using the R. sphaeroides Affymetrix gene chip. These deletion mutant expression profiles were compared to that of wild type cells to determine differentially expressed genes regulated by these transcription factors.
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| |
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| Contributor(s) |
Imam S, Donohue TJ |
| Citation(s) |
25650399 |
| |
| Submission date |
Nov 19, 2014 |
| Last update date |
May 04, 2015 |
| Contact name |
Timothy J Donohue |
| E-mail(s) |
tdonohue@bact.wisc.edu
|
| Phone |
608-265-8465
|
| Organization name |
University of Wisconsin - Madison
|
| Department |
Bacteriology
|
| Lab |
Timothy Donohue
|
| Street address |
1552 University Avenue
|
| City |
Madison |
| State/province |
WI |
| ZIP/Postal code |
53726 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL162 |
[uwyRhodo1a] Rhodobacter sphaeroides 2.4.1 GeneChip |
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| Samples (12)
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| This SubSeries is part of SuperSeries: |
| GSE63450 |
CceR and AkgR regulate of central carbon and energy metabolism in α-Proteobacteria |
|
| Relations |
| BioProject |
PRJNA267773 |
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