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Series GSE63193 Query DataSets for GSE63193
Status Public on Sep 23, 2016
Title Histone H3K36M mutation impairs mesenchymal differentiation and drives sarcoma development [ChIP-Seq]
Organism Mus musculus
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary The goal of this study is to understand the genome-wide alterations in chromatin landscapy induced by a histone mutation (H3.3 K36M) derived from chondroblastomas
Overall design Examination of 2 different histone modifications in 2 cell types.
Contributor(s) Lu C, Lewis PW, Jain SU
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Submission date Nov 12, 2014
Last update date May 15, 2019
Contact name Peter W Lewis
Phone 608-316-4388
Organization name University of Wisconsin-Madison
Department Department of Biomolecular Chemistry
Lab Room 2174, Wisconsin Institute for Discovery
Street address 330 N Orchard Street
City Madison
State/province Wisconsin
ZIP/Postal code 53715
Country USA
Platforms (1)
GPL17021 Illumina HiSeq 2500 (Mus musculus)
Samples (6)
GSM1543687 Input_DNA_H3.3 WT
GSM1543688 H3K36me3_ChIPSeq_H3.3 WT
GSM1543689 H3K27me3_ChIPSeq_H3.3 WT
This SubSeries is part of SuperSeries:
GSE63195 Histone H3K36M mutation impairs mesenchymal differentiation and drives sarcoma development
BioProject PRJNA266971
SRA SRP049717

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE63193_Peaks_K27me3.bed.gz 34.1 Kb (ftp)(http) BED
GSE63193_Peaks_K36me3.bed.gz 57.5 Kb (ftp)(http) BED
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Processed data are available on Series record

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