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Status |
Public on Oct 01, 2015 |
Title |
Substantial Reprogramming of the Thellungiella salsuginea Transcriptome in Response to UV and Silver Nitrate Challenge |
Organism |
Eutrema salsugineum |
Experiment type |
Expression profiling by array
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Summary |
The transcriptional response of T. salsuginea to UV irradiation and AgNO3 was monitored by microarray analysis. Most transcripts (respectively 70% and 78%) were significantly differentially regulated and a large overlap between the two treatments was observed (54% of total). While core genes of the biosynthesis of aliphatic glucosinolates were repressed, tryptophan and indole glucosinolate biosynthetic genes, as well as defence-related WRKY transcription factors, were consistently upregulated.
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Overall design |
Microarray analysis of four biological replicates was conducted with Agilent arrays. Statistically robust differential regulation was observed for the majority of transcripts.
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Contributor(s) |
Mucha S, Walther D, Müller T, Hincha DK, Glawischnig E |
Citation(s) |
26063239 |
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Submission date |
Oct 23, 2014 |
Last update date |
Jan 11, 2016 |
Contact name |
Erich Glawischnig |
Organization name |
TU Muenchen
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Department |
Plant Science
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Street address |
Emil-Ramann-Str. 8
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City |
Freising |
ZIP/Postal code |
85354 |
Country |
Germany |
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Platforms (1) |
GPL19319 |
Agilent-065426 Thellungiella_8x60K array |
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Samples (12)
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Relations |
BioProject |
PRJNA264721 |