|
| Status |
Public on Oct 01, 2015 |
| Title |
Substantial Reprogramming of the Thellungiella salsuginea Transcriptome in Response to UV and Silver Nitrate Challenge |
| Organism |
Eutrema salsugineum |
| Experiment type |
Expression profiling by array
|
| Summary |
The transcriptional response of T. salsuginea to UV irradiation and AgNO3 was monitored by microarray analysis. Most transcripts (respectively 70% and 78%) were significantly differentially regulated and a large overlap between the two treatments was observed (54% of total). While core genes of the biosynthesis of aliphatic glucosinolates were repressed, tryptophan and indole glucosinolate biosynthetic genes, as well as defence-related WRKY transcription factors, were consistently upregulated.
|
| |
|
| Overall design |
Microarray analysis of four biological replicates was conducted with Agilent arrays. Statistically robust differential regulation was observed for the majority of transcripts.
|
| |
|
| Contributor(s) |
Mucha S, Walther D, Müller T, Hincha DK, Glawischnig E |
| Citation(s) |
26063239 |
| |
| Submission date |
Oct 23, 2014 |
| Last update date |
Jan 11, 2016 |
| Contact name |
Erich Glawischnig |
| Organization name |
TU Muenchen
|
| Department |
Plant Science
|
| Street address |
Emil-Ramann-Str. 8
|
| City |
Freising |
| ZIP/Postal code |
85354 |
| Country |
Germany |
| |
|
| Platforms (1) |
| GPL19319 |
Agilent-065426 Thellungiella_8x60K array |
|
| Samples (12)
|
|
| Relations |
| BioProject |
PRJNA264721 |
Less...
More...