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Series GSE62613 Query DataSets for GSE62613
Status Public on Oct 22, 2016
Title Nuclear TIGAR mediates an epigenetic-metabolic loop via Nrf2 for cancer therapeutics resistance
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary Epigenetic and metabolic reprogrammings are implicated in cancer progression with unclear mechanisms. We report here that the histone methyltransferase NSD2 drives cancer cell and tumor resistance to therapeutics such as tamoxifen, doxorubicin, and radiation by reprogramming of glucose metabolism. NSD2 coordinately up-regulates expression of TIGAR, HK2 and G6PD and stimulates pentose phosphate pathway (PPP) production of NADPH for ROS reduction. We discover that elevated expression of TIGAR, previously characterized as a fructose-2,6-bisphosphatase, is localized in the nuclei of resistant tumor cells where it stimulates NSD2 expression and global H3K36me2 mark. Mechanistically, TIGAR interacts with the antioxidant regulator Nrf2 and facilitates chromatin assembly of Nrf2-H3K4me3 methylase MLL1 and elongating Pol-II, independent of its metabolic enzymatic activity. In human tumors, high levels of NSD2 correlate strongly with early recurrence and poor survival and are associated with nuclear-localized TIGAR. This study defines a nuclear TIGAR-mediated, epigenetic autoregulatory loop functioning in redox rebalance for resistance to tumor therapeutics.
 
Overall design A total of 4 samples were analyzed in this study. The study included two cell lines, MCF7 and the tamoxifen-resistant subline TMR. Both were were cultured in medium containing vehicle control and/or 4-hydroxytamoxifen (Tam). The untreated MCF7 and TMR cell lines served as controls for the study.
 
Contributor(s) Chen H, Wang J, Tepper CG
Citation(s) 27164560
NIH grant(s)
Grant ID Grant title Affiliation Name
P30 CA093373 CANCER CENTER SUPPORT GRANT-P30: Cancer Center Support Grant - P30: Cancer Center Support Grant - P30: Cancer Center Support Grant - P30: Cancer Center Support Grant - P30: Cancer Center Support Grant - P30: Cancer Center Support Grant - P30: Cancer Center Support Grant - P30: Cancer Center Support Grant - P30: Cancer Center Support Grant - P30: Cancer Center Support Grant - P30: Cancer Center Support Grant - P30: Cancer Center Support Grant - P30: Cancer Center Support Grant - P30: Cancer Center Support Grant - P30: Cancer Center Support Grant - P30: Cancer Center Support Grant - P30: Cancer Center Support Grant - P30: Cancer Center Support Grant-P30: Cancer Center Support Grant-P30: Cancer Center Support Grant-P30: Cancer Center Support Grant-P30: Cancer Center Support Grant-P30: Cancer Center Support Grant-P30: Cancer Center Support Grant-P30: Cancer Center Support Grant-P30: Cancer Center Support Grant-P30: Cancer Center Support Grant-P30: Cancer Center Support Grant-P30 UNIVERSITY OF CALIFORNIA DAVIS Ralph W. deVere White
Submission date Oct 22, 2014
Last update date May 15, 2019
Contact name Clifford G. Tepper
E-mail(s) cgtepper@ucdavis.edu
Phone 916-734-7195
Organization name UC Davis School of Medicine
Department Biochemistry and Molecular Medicine
Street address 4645 2nd Avenue, Room 2300A
City Sacramento
State/province CA
ZIP/Postal code 95817
Country USA
 
Platforms (1)
GPL11154 Illumina HiSeq 2000 (Homo sapiens)
Samples (4)
GSM1530029 MCF7
GSM1530030 MCF7_40HT
GSM1530031 TMR
Relations
BioProject PRJNA264542
SRA SRP049171

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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE62613_RAW.tar 3.2 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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