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Series GSE62571 Query DataSets for GSE62571
Status Public on Nov 14, 2015
Title Comparative Analysis of the hippocampal transcriptome of WT and NONO KO mice
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Identifying causes of sporadic intellectual disability remains a considerable medical challenge. Here, we demonstrate that null mutations in the NONO gene, a member of the Drosophila Behavior Human Splicing (DBHS) protein family, are a novel cause of X-linked syndromic intellectual disability. Comparing humans to Nono-deficient mice revealed related behavioral and craniofacial anomalies, as well as global transcriptional dysregulation. Nono-deficient mice also showed deregulation of a large number of synaptic transcripts, causing a disorganization of inhibitory synapses, with impaired postsynaptic scaffolding of gephyrin. Alteration of gephyrin clustering could be rescued by over-expression of Gabra2 in NONO-compromised neurons. These findings link NONO to intellectual disability and first highlight the key role of DBHS proteins in functional organization of GABAergic synapses.
 
Overall design Hippocampal mRNA profiles of adult wild type (WT) and NONO KO mice were generated by deep sequencing, in six replicates using Illumina
 
Contributor(s) Mircsof D, Brown SA
Citation(s) 26571461
Submission date Oct 22, 2014
Last update date May 15, 2019
Contact name Steven A. Brown
E-mail(s) steven.brown@pharma.uzh.ch
Organization name University Zurich
Street address Winterthurerstrasse 190
City Zurich
ZIP/Postal code 8057
Country Switzerland
 
Platforms (1)
GPL13112 Illumina HiSeq 2000 (Mus musculus)
Samples (12)
GSM1529474 WT1 CT10
GSM1529475 WT2 CT10
GSM1529476 WT3 CT10
This SubSeries is part of SuperSeries:
GSE62575 NONO mutations are a novel cause of syndromic intellectual disability and inhibitory synaptic defects
Relations
BioProject PRJNA264457
SRA SRP049139

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE62571_RAW.tar 38.7 Mb (http)(custom) TAR (of TXT)
GSE62571_result--KO--over--WT.txt.gz 2.2 Mb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file
Processed data are available on Series record

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