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Series GSE62562 Query DataSets for GSE62562
Status Public on Apr 22, 2015
Title Erosion of X chromosome inactivation in human pluripotent cells initiates with XACT coating and depends on a specific heterochromatin landscape
Organism Homo sapiens
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary Comparison of H3K9me3 and H3K27me3 distribution in homogeneous XaXi and XaXe H9 human embryonic stem cells and in IMR90 cells.
 
Overall design Examination of 2 different histone modifications in 3 cell types.
 
Contributor(s) Ouimette J, Vallot C, Rougeulle C
Citation(s) 25921272
Submission date Oct 21, 2014
Last update date May 15, 2019
Contact name Jean-François Ouimette
E-mail(s) jean-francois.ouimette@univ-paris-diderot.fr
Organization name Université Paris Diderot
Department UMR7216 Epigenetics and Cell Fate
Lab ARNs non-codants, Différenciation et Développement
Street address 35 rue Hélène Brion
City Paris
ZIP/Postal code 75205 Cedex 13
Country France
 
Platforms (1)
GPL11154 Illumina HiSeq 2000 (Homo sapiens)
Samples (9)
GSM1528885 H3K27me3_H9_XaXi
GSM1528886 H3K27me3_H9_XaXe
GSM1528887 H3K27me3_IMR90
Relations
BioProject PRJNA264416
SRA SRP049108

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE62562_RAW.tar 12.4 Mb (http)(custom) TAR (of BED)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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