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Series GSE62559 Query DataSets for GSE62559
Status Public on Oct 16, 2015
Title B cell survival and development is dependent on the coordination of NFkappaB family members RelB and cRel
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Identify genes which are induced in wild type, crel ko, and relbcrle dbko B cells under BAFF stimulation, and find the differential expressed genes which are distinct from wildtype controls.
 
Overall design RNA-seq analysis of wild type, crelko, relbcrel dbko follicular B cells stimulated with BAFF ligand for 6 hours and wildtype only for 27 hours
 
Contributor(s) Almaden J, Birnbaum H, Davis-Turak J, Hoffmann A
Citation(s) 26773039
Submission date Oct 21, 2014
Last update date May 15, 2019
Contact name Alexander Hoffmann
E-mail(s) ahoffmann@ucla.edu
Organization name UCLA
Department MIMG
Lab Signaling systems lab
Street address 570 Boyer Hall
City Los Angeles
State/province CA
ZIP/Postal code 90095
Country USA
 
Platforms (1)
GPL13112 Illumina HiSeq 2000 (Mus musculus)
Samples (14)
GSM1528826 cko (1) BAFF 0hr
GSM1528827 cko (1) BAFF 6hr
GSM1528828 dbko (1) BAFF 0hr
Relations
BioProject PRJNA264412
SRA SRP049105

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE62559_RAW.tar 1.9 Mb (http)(custom) TAR (of TAB)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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