NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE62455 Query DataSets for GSE62455
Status Public on Apr 24, 2015
Title Gene expression of paired samples of hepatic stellate cells (HSC) and hepatocyte cell culture (HCC) treated with conditioned media of HSC cells
Organism Homo sapiens
Experiment type Expression profiling by array
Summary All living cells rely on the communication with other cells to ensure their function and survival. Molecular signals are sent among cells of the same cell type and from cells of one cell type to another. In cancer, not only the cancer cells themselves are responsible for the malignancy, but also stromal (non-cancerous) cells and the molecular signals they send to cancer cells are important factors that determine the severity and outcome of the disease. Therefore, the identification of stromal signals and their influence on cancer cells is important when looking for novel treatment strategies.
We have generated gene expression profiles of both stromal (HSC), and liver cancer (HCC) cells treated with HSC conditioned medium to elucidate cell communication from HSC to HCC cells.
 
Overall design 15 HSC samples, 15 HCC samples treated with conditioned medium of the HSC samples, 4 control hep samples without treatment
 
Contributor(s) Engelmann JC, Hellerbrand C
Citation(s) 26020769
Submission date Oct 17, 2014
Last update date Jul 27, 2015
Contact name Julia C Engelmann
E-mail(s) julia.engelmann@ur.de
Organization name University of Regensburg
Department Statistical Bioinformatics
Street address Josef-Engert-Str. 9
City Regensburg
ZIP/Postal code 93053
Country Germany
 
Platforms (1)
GPL19306 [HuGene10stv1_Hs_ENSG] Affymetrix GeneChip Human Gene 1.0 ST Array [Brainarray Version 12 CDF]
Samples (34)
GSM1527243 hep_ctrl_1
GSM1527244 hep_ctrl_2
GSM1527245 hep_ctrl_3
Relations
BioProject PRJNA264152

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE62455_RAW.tar 155.8 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap