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Series GSE60340 Query DataSets for GSE60340
Status Public on Feb 01, 2015
Title Pathway Profiling of Replicative and Induced Senescence
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary RNA-seq was performed on LFS MDAH041 cells that were young (PD10-12), aging (PD17-19) and replicatively senescent (PD28-30), as well as spontaneously immortal cells and cells that were induced into senescence or quiescence, in order to profile the pathways common in all 4 types of sensecence and the pathways affected as a cell approaches senescence.
 
Overall design RNA was sequenced in biological triplicates of each sample using the Illumina HiSeq2000
 
Contributor(s) Purcell M, Tainsky M, Kruger A
Citation(s) 25483067
Submission date Aug 12, 2014
Last update date May 15, 2019
Contact name Maggie Purcell
Organization name Wayne State University
Street address 110 E Warren
City Detroit
ZIP/Postal code 48201
Country USA
 
Platforms (1)
GPL11154 Illumina HiSeq 2000 (Homo sapiens)
Samples (24)
GSM1473759 Immortal 1
GSM1473764 Immortal 2
GSM1473767 Immortal 3
Relations
BioProject PRJNA258058
SRA SRP045441

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE60340_RAW.tar 133.0 Mb (http)(custom) TAR (of GTF)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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