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Series GSE60285 Query DataSets for GSE60285
Status Public on Jun 30, 2015
Title HEB associates with PRC2 and SMAD2/3 to regulate developmental fates [RNA-Seq]
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary We report the interaction between HEB and PRC2 components in mouse embryonic stem cells (ESCs)
Overall design We profiled gene expression for biological triplicate shControl- and shHEB-infected ESCs and differentiated embryoid body (EB) in serum-free defined culture system with or without activin treatment
Contributor(s) Yoon S, Foley JW, Baker JC
Citation(s) 25775035
Submission date Aug 11, 2014
Last update date May 15, 2019
Contact name Se-Jin Yoon
Phone 650-736-0278
Organization name Stanford University
Department Genetics
Street address 300 Pasteur Drive, Alway M311
City Stanford
State/province CA
ZIP/Postal code 94305
Country USA
Platforms (1)
GPL13112 Illumina HiSeq 2000 (Mus musculus)
Samples (18)
GSM1470291 ESC_shControl_rep1
GSM1470292 ESC_shControl_rep2
GSM1470293 ESC_shControl_rep3
This SubSeries is part of SuperSeries:
GSE60286 HEB associates with PRC2 and SMAD2/3 to regulate developmental fates
BioProject PRJNA257963
SRA SRP045417

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Supplementary file Size Download File type/resource
GSE60285_DESeq2_analysis_EB_activin+.tsv.gz 2.5 Mb (ftp)(http) TSV
GSE60285_DESeq2_analysis_EB_activin-.tsv.gz 2.8 Mb (ftp)(http) TSV
GSE60285_DESeq2_analysis_ESC.tsv.gz 2.7 Mb (ftp)(http) TSV
GSE60285_transcript_counts.tsv.gz 991.7 Kb (ftp)(http) TSV
GSE60285_transcripts.gtf.gz 15.9 Mb (ftp)(http) GTF
GSE60285_transcripts_last1000.gtf.gz 5.2 Mb (ftp)(http) GTF
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Raw data are available in SRA
Processed data are available on Series record

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