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Series GSE60251 Query DataSets for GSE60251
Status Public on Aug 31, 2017
Title The whole transcriptome expression profiling comparison between the CtBP1 knockdown, CtBP2 knockdown and scramble control in ovarian cancer SKOV3 cells
Organism Homo sapiens
Experiment type Expression profiling by array
Summary To discover the core gene expression features of CtBP1, CtBP2 differently regulated in ovarian cancer SKOV3 cells.
The compared the whole transcript expression profiling between CtBP1 knockdown, CtBP2 knockdown and scramble control in ovarian cancer skov3 cells.
Overall design The 2 scramble control clones, 3 CtBP1 knockdown clones and 2 CtBP2 knockdown clones from ovarian cancer SKOV3 cells were used to discover the key feature genes that CtBP1/CtBP2 differential regulated . The RNA was extracted from well cultured cells using TRIzol reagent, and whole transcriptome gene expression profiling were performed using an Affymetrix Human Gene 1.1 ST microarray platform.
Contributor(s) Liu S, Ng S
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Submission date Aug 08, 2014
Last update date Sep 01, 2017
Contact name Shu-Wing Ng
Phone 6172780072
Organization name Brigham and Women’s Hospital; Harvard Medical School
Department Department of Obstetrics, Gynecology and Reproductive Biology
Lab Laboratory of Gynecologic Oncology
Street address 221 Longwood Avenue
City Boston
State/province MA
ZIP/Postal code 02115
Country USA
Platforms (1)
GPL11532 [HuGene-1_1-st] Affymetrix Human Gene 1.1 ST Array [transcript (gene) version]
Samples (7)
GSM1468719 SKOV3-SC1
GSM1468720 SKOV3-SC2
GSM1468721 SKOV3-CtBP1-KD1
BioProject PRJNA257819

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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE60251_RAW.tar 27.7 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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