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| Status |
Public on Jul 08, 2014 |
| Title |
Genome-wide changes in the circadian transcriptional program in Synechococcus elongatus PCC 7942 |
| Organism |
Synechococcus elongatus PCC 7942 = FACHB-805 |
| Experiment type |
Expression profiling by array
|
| Summary |
Circadian input kinas A (cikA) null cells severly distorts the genome-wide output of the circadian clock
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| Overall design |
Synechococcus cultures (both wildtype and ΔcikA null cells) were synchronized with two light-dark (12h:12h) cycle before release into continuous light. Samples were collected at 4 h intervals for the next 24 h, total RNA was isolated from samples collected at each time points and genome-wide expression was measured using custom-designed microarrays
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| Contributor(s) |
Pattanayak GK, Phong C, Rust MJ |
| Citation(s) |
25127221 |
| |
| Submission date |
Jul 07, 2014 |
| Last update date |
Dec 24, 2014 |
| Contact name |
Michael Joseph Rust |
| E-mail(s) |
mrust@uchicago.edu
|
| Phone |
773-834-1463
|
| Organization name |
University of Chicago
|
| Department |
Molecular Genetics and Cell Biology
|
| Lab |
KCBD 10124
|
| Street address |
900 E 57th ST
|
| City |
Chicago |
| State/province |
IL |
| ZIP/Postal code |
60637 |
| Country |
USA |
| |
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| Platforms (1) |
| GPL9534 |
Agilent-020846 Synechococcus elongatus PCC 7942 Oligo Microarray |
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| Samples (12)
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| Relations |
| BioProject |
PRJNA254452 |
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