|
| Status |
Public on Jun 11, 2014 |
| Title |
Breast Cancer RNA-seq |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
RNA-seq was performed on breast cancer cell lines and primary tumors
|
| |
|
| Overall design |
RNA-seq was performed on 28 breast cancer cell lines, 42 Triple Negative Breast Cancer (TNBC) primary tumors, and 42 Estrogen Receptor Positive (ER+) and HER2 Negative Breast Cancer primary tumors, 30 uninovlved breast tissue samples that were adjacent to ER+ primary tumors, 5 breast tissue samples from reduction mammoplasty procedures performed on patients with no known cancer, and 21 uninvolved breast tissue samples that were adjacent to TNBC primary tumors.
|
| |
|
| Contributor(s) |
Varley KE, Myers RM |
| Citation(s) |
24929677 |
| |
| Submission date |
Jun 01, 2014 |
| Last update date |
May 15, 2019 |
| Contact name |
Katherine E Varley |
| E-mail(s) |
kt.varley@hci.utah.edu
|
| Organization name |
Huntsman Cancer Institute University of Utah
|
| Department |
Department of Oncological Sciences
|
| Lab |
Varley Lab
|
| Street address |
2000 Circle of Hope, Room 3719
|
| City |
Salt Lake City |
| State/province |
UT |
| ZIP/Postal code |
84112 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL11154 |
Illumina HiSeq 2000 (Homo sapiens) |
|
| Samples (168)
|
|
| Relations |
| BioProject |
PRJNA251383 |
| SRA |
SRP042620 |
Less...
More...