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| Status |
Public on Dec 01, 2014 |
| Title |
Expression profiling, Miz1 location analysis and histone modification analysis in 70Z/3 and P6D4 cells |
| Organism |
Mus musculus |
| Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
Expression profiling by high throughput sequencing
|
| Summary |
Expression profiling by RNA-Seq was performed on 70Z3 and P6D4 cells as well as ChIP-Seq location analysis of Miz1, H3K4Me3, H3K27Ac and H3K9Ac. This was done as part of a larger study regarding the role of Miz1 as a regulator of Trp53 translation.
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| Overall design |
RNA-Seq was carried out in triplicate for each cell line. Miz1 and histone mark ChIP-Seqs were carried out once for each cell line from a single cell lysate preparation and thus have the same input control.
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| |
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| Contributor(s) |
Rashkovan M, Möröy T, Vadnais C |
| Citation(s) |
25468973 |
| |
| Submission date |
May 15, 2014 |
| Last update date |
May 15, 2019 |
| Contact name |
Möröy Tarik |
| E-mail(s) |
tarik.moroy@ircm.qc.ca
|
| Organization name |
Insititut de Recherches Cliniques
|
| Street address |
110 Pine avenue West
|
| City |
Montreal |
| State/province |
Quebec |
| ZIP/Postal code |
H2W 1R7 |
| Country |
Canada |
| |
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| Platforms (1) |
| GPL13112 |
Illumina HiSeq 2000 (Mus musculus) |
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| Samples (16)
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| Relations |
| BioProject |
PRJNA247734 |
| SRA |
SRP042006 |
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