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Series GSE57133 Query DataSets for GSE57133
Status Public on Mar 05, 2015
Title ErbB2 Pathway Activation upon Smad4 Loss Promotes Lung Tumor Growth and Metastasis [expression]
Organism Mus musculus
Experiment type Expression profiling by array
Summary Lung cancer remains the leading cause of cancer death. Genome sequencing of lung tumors from patients with Squamous Cell Carcinoma has identified SMAD4 to be frequently mutated. Here we used a novel mouse model to determine the molecular mechanisms regulated by loss of Smad4 which lead to lung cancer progression. Mice with ablation of Pten and Smad4 in airway epithelium developed metastatic adenosquamous tumors. Comparative transcriptomic and in vivo cistromic analyses determined that loss of PTEN and SMAD4 resulted in activation of the ELF3 and the ErbB2 pathway due to decreased ERRFI1’s expression, a negative regulator of ERBB2 in mice and human cells. The combinatorial inhibition of ErbB2 and Akt signaling attenuated tumor progression and cell invasion, respectively. Expression profiles analysis of human lung tumors substantiated the importance of the ErbB2/Akt/ELF3 signaling pathway as both prognostic biomarkers and therapeutic drug targets for treating lung cancer.
 
Overall design The microarray data includes two different ages of mouse lung samples.

The microarray for the study on late stage was did on 12-month-old wild type mouse lungs and Ptend/dSmad4d/d mouse lung tumors. This study was used to identify the significantly changed genes between lung tumors and wild type lungs.

The microarray for the study on early stage was did on 7-month-old wild type, Ptend/d and Ptend/dSmad4d/d mouse lungs. This study was used to identify the significantly changed driven genes before the lung tumor initiation and metastasis.
 
Contributor(s) Liu J, Cho SN, Akkanti B, Jin N, Mao J, Long W, Chen T, Zhang Y, Tang X, Wistuba II, Creighton CJ, Kheradmand F, DeMayo FJ
Citation(s) 25753424
Submission date Apr 28, 2014
Last update date Feb 11, 2019
Contact name Jian Liu
E-mail(s) JianL@intl.zju.edu.cn
Organization name Zhejiang University
Department Zhejiang University - University of Edinburgh Institute
Lab Jian Liu's lab
Street address 718 East Haizhou Rd.
City Haining
State/province Zhejiang
ZIP/Postal code 314400
Country China
 
Platforms (1)
GPL1261 [Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array
Samples (15)
GSM1375775 Mouse lung at 12 months (48343)
GSM1375776 Mouse lung at 12 months (49424)
GSM1375777 Mouse lung at 12 months (44322)
Relations
BioProject PRJNA245533

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE57133_RAW.tar 55.0 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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