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| Status |
Public on May 25, 2016 |
| Title |
Transcriptional profiles by deep sequencing (RNA-seq) of papillomas generated using the DMBA/TPA protocol from control and transgenic Nanog overexpressing mice |
| Organism |
Mus musculus |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
NANOG is a key pluripotency factor in embryonic stem cells that is frequently expressed in squamous cell carcinomas (SCCs). However, a direct link between NANOG and SCCs remains to be established. Here, we show that inducible overexpression of NANOG in mouse skin epithelia dramatically promotes the formation of carcinomas upon chemical carcinogenesis. Gene expression analyses in pre-malignant skin indicate that NANOG induces a large set of genes associated to stemness and to epithelial-mesenchymal transition (EMT).
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| |
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| Overall design |
4 papillomas from different control mice (CTR), and 3 papillomas from different transgenic Nanog overexpressing mice (TG)
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| |
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| Contributor(s) |
Palla AR, Graña O, Serrano M |
| Citation(s) |
25988972 |
| Submission date |
Apr 07, 2014 |
| Last update date |
May 15, 2019 |
| Contact name |
Manuel Serrano |
| E-mail(s) |
manuel.serrano@irbbarcelona.org
|
| Organization name |
IRB
|
| Department |
Molecular Medicine
|
| Lab |
Cellular Plasticity and Disease
|
| Street address |
Parc Científic de Barcelona, C/ Baldiri Reixac 10
|
| City |
Barcelona |
| State/province |
Barcelona |
| ZIP/Postal code |
08028 |
| Country |
Spain |
| |
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| Platforms (1) |
| GPL11002 |
Illumina Genome Analyzer IIx (Mus musculus) |
|
| Samples (7)
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|
| Relations |
| BioProject |
PRJNA243917 |
| SRA |
SRP041005 |
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