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Series GSE55744 Query DataSets for GSE55744
Status Public on Aug 26, 2014
Title Comparison of the transcriptional profiles of male E13.5 wild type and L/H-Pgds-/- gonads
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary The goals of this study are to compare transcriptome profiling of L/H-Pgds-/- gonads to that of WT (RNA-seq)
 
Overall design Methods: mRNA profiles of E13.5 wild-type (WT) and L- and H- prostaglandin D synthases (L/H-Pgds−/−) embryonic gonad were generated by deep sequencing, in triplicate, using Illumina HiSeq2000. qRT–PCR validation was performed using TaqMan and SYBR Green assays
 
Contributor(s) Boizet-Bonhoure B, Poulat F
Citation(s) 25142465
Submission date Mar 10, 2014
Last update date May 15, 2019
Contact name Brigitte Boizet-Bonhoure
E-mail(s) boizet@igh.cnrs.fr
Phone 33 4 34 35 99 40
Organization name CNRS
Department Genetic and Development
Lab IGH CNRS UPR1142
Street address 141 rue de la Cardonille
City Montpellier
ZIP/Postal code 34396
Country France
 
Platforms (1)
GPL13112 Illumina HiSeq 2000 (Mus musculus)
Samples (6)
GSM1342732 E13_5_WT1
GSM1342733 E13_5_WT3
GSM1342734 E13_5_WT4
Relations
BioProject PRJNA240878
SRA SRP039609

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE55744_Pseudo_Counts_UpperQuartile_RNA-Seq_BOIZET.txt.gz 1.1 Mb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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