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Series GSE55208 Query DataSets for GSE55208
Status Public on Feb 21, 2014
Title Discovery of novel and conserved microRNAs in Spirodela polyrhiza by deep sequencing
Organism Spirodela polyrhiza
Experiment type Non-coding RNA profiling by high throughput sequencing
Summary MicroRNAs (miRNAs) are a class of small, endogenous non-coding RNAs, which play key roles in a variety of developmental and physiological processes by regulating gene expressions at post-transcriptional or translational levels. The objective of our work was to explore conserved and novel miRNAs in Spirodela at the whole-genome level, and further characterize their potential roles in gene regulation.
 
Overall design 1 sample
 
Contributor(s) Tang J, Zhang Y, Zhang Y, Ma J
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Submission date Feb 20, 2014
Last update date May 15, 2019
Contact name Jie Tang
Organization name School of Environment and Energy, Peking University Shenzhen Graduate School
Street address Rm. E118, PKU Campus, Shenzhen University Town
City Shenzhen
State/province Guangdong
ZIP/Postal code 518055
Country China
 
Platforms (1)
GPL18308 Illumina HiSeq 2000 (Spirodela polyrhiza)
Samples (1)
GSM1331603 Spirodela_polyrhiza_5a
Relations
BioProject PRJNA238917
SRA SRP038706

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE55208_RAW.tar 22.5 Mb (http)(custom) TAR (of FASTA)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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