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Series GSE53093 Query DataSets for GSE53093
Status Public on Jan 27, 2014
Title KDM5B focuses H3K4 methylation near promoters and enhancers during embryonic stem cell self-renewal and differentiation
Organism Mus musculus
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Expression profiling by high throughput sequencing
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Citation(s) 24495580
Submission date Dec 06, 2013
Last update date May 15, 2019
Contact name Benjamin L Kidder
E-mail(s) benjamin.kidder@wayne.edu
Organization name Wayne State University
Department Oncology
Lab Laboratory of Epigenomics
Street address 4100 John R St
City Detroit
State/province MI
ZIP/Postal code 48201
Country USA
 
Platforms (2)
GPL11002 Illumina Genome Analyzer IIx (Mus musculus)
GPL13112 Illumina HiSeq 2000 (Mus musculus)
Samples (61)
GSM1282126 KDM5B_mESC
GSM1282127 shLuc_H3K4me3_mESC_rep1
GSM1282128 shLuc_H3K4me2_mESC_rep1
This SuperSeries is composed of the following SubSeries:
GSE53087 KDM5B focuses H3K4 methylation near promoters and enhancers during embryonic stem cell self-renewal and differentiation [ChIP-Seq]
GSE53090 KDM5B focuses H3K4 methylation near promoters and enhancers during embryonic stem cell self-renewal and differentiation [RNA-Seq]
Relations
BioProject PRJNA230819

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE53093_RAW.tar 7.8 Gb (http)(custom) TAR (of BED, BEDGRAPH, RPKM)
SRA Run SelectorHelp
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