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Series GSE51566 Query DataSets for GSE51566
Status Public on Jul 31, 2014
Title Effect of experimental stroke on meningeal gene expression and the influence of mast cells on these gene changes
Organism Mus musculus
Experiment type Expression profiling by array
Summary Stroke is a leading cause of adult disability and death. Inflammation plays an important role in stroke pathology, but the factors which promote brain inflammation in this setting remain to be fully defined. Here we investigate the meninges, the membranes that envelop the brain, for a potential role in modulating immune cell trafficking to the brain. We also investigate the potential of mast cells (MCs) to modulate this response as MCs are often considered as 'first responders' playing a critical role in the initiation and development of inflammation in many disease settings. We find that stroke increases expression of inflammatory and immune response genes in the meninges in mice consistent with a potential role in modulating immune cell trafficking. Moreover, genetic and cell transfer approaches identify MCs as important modulators of this response.
 
Overall design Three categories of male mice were used: wild-type (WT) mice, mast cell-deficient (KO) mice, and mast cell-engrafted mice (EN), which are mast cell-deficient mice repaired of their mast cell deficiency by engraftment of mast cells i.v. 8-10 weeks prior to experimentation. The mouse strain was WBB6F1-Kit+/+ (wild-type ) and WBB6F1-KitW/W-v (mast cell-deficient ). Each mouse category was subdivided into two groups, naïve (N) and stroke (S), with n=3 per group. The stroke model was 30 minute filament occlusion of the middle cerebral artery. The dura were removed from the mouse brains at 2d post-stroke and from aged-matched naïve mice for microarray analysis. Dura were not pooled but run on separate arrays.
 
Contributor(s) Arac A, Grimbaldeston MA, Tsykin A, Goodall GJ, Schlecht U, Galli SJ, Bliss TM, Steinberg GK
Citation(s) 25134760
Submission date Oct 22, 2013
Last update date Mar 04, 2019
Contact name Ulrich Schlecht
E-mail(s) schlecht.ulrich@gmail.com
Phone 6502136281
Organization name Stanford University
Department Biochemistry
Lab Ronald W. Davis
Street address 3165 Porter Drive
City Palo Alto
ZIP/Postal code 94304
Country USA
 
Platforms (1)
GPL6246 [MoGene-1_0-st] Affymetrix Mouse Gene 1.0 ST Array [transcript (gene) version]
Samples (18)
GSM1248486 wild type - naïve - 1
GSM1248487 wild type - naïve - 2
GSM1248488 wild type - naïve - 3
Relations
BioProject PRJNA223426

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Supplementary file Size Download File type/resource
GSE51566_RAW.tar 80.1 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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