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| Status |
Public on Nov 14, 2013 |
| Title |
Expression data from MTF mutant roots |
| Organism |
Arabidopsis thaliana |
| Experiment type |
Expression profiling by array
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| Summary |
Mutation of MTF in Arabidopsis increases Agrobacterium-mediated transformation susceptibility. Being a putative transcription factor, different genes controlling transformation may be regulated by MTF.
We used microarrays to detail the global programme of gene expression and to identify genes that play a role in transformation.
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| Overall design |
Root samples from mutants MTF1-1 and MTF1-4, along with the wild-type, Col0, were collected after 12 days of growth in B5 liquid medium. RNA was extracted from three biological replicates, with 20 plants in each replicate, and used for hybridization to Affymetrix ATH1 microarrays.
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| Contributor(s) |
Sardesai N, Gelvin SB |
| Citation(s) |
24255177 |
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| Submission date |
Sep 27, 2013 |
| Last update date |
Jun 12, 2017 |
| Contact name |
Nagesh Sardesai |
| Organization name |
Purdue University
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| Department |
Biological Sciences
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| Street address |
201 W. State St.
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| City |
West Lafayette |
| State/province |
IN |
| ZIP/Postal code |
47907 |
| Country |
USA |
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| Platforms (1) |
| GPL198 |
[ATH1-121501] Affymetrix Arabidopsis ATH1 Genome Array |
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| Samples (9)
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| Relations |
| BioProject |
PRJNA221784 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE51236_RAW.tar |
21.0 Mb |
(http)(custom) |
TAR (of CEL, CHP) |
| Processed data included within Sample table |
| Processed data provided as supplementary file |
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