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Series GSE48944 Query DataSets for GSE48944
Status Public on Jul 18, 2013
Title Gene expression profiles of human kidneys
Organism Homo sapiens
Experiment type Expression profiling by array
Summary The association of cytosine methylation and gene expression in the human kidneys is yet to be determined, here we have 25 pairs of the methylation and gene expression profile.
Overall design We sought to decrease the cell type heterogeneity of kidney tissues to increase the resolution of expression profiles. To that end, microdissected human kidney tissue are used for RNA extraction and hybridization on Affymetrix microarrays.
Contributor(s) Ko Y, Mohtat D, Suzuki M, Park AS, Izquierdo MC, Han SY, Kang HM, Si H, Hostetter T, Pullman J, Fazzari M, Verma A, Zheng D, Greally JM, Susztak K
Citation(s) 24098934
Submission date Jul 17, 2013
Last update date Dec 06, 2018
Contact name Yi-An Ko
Organization name UPeenn
Department Genetics & Gene Regulation
Lab Susztak
Street address 415 curie blvd
City Philadelphia
State/province Pennsylvania
ZIP/Postal code 19104
Country USA
Platforms (1)
GPL571 [HG-U133A_2] Affymetrix Human Genome U133A 2.0 Array
Samples (25)
GSM1187245 Kidney Tubules biological rep1
GSM1187246 Kidney Tubules biological rep2
GSM1187247 KidneyTubules, biological rep3
BioProject PRJNA212388

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE48944_RAW.tar 50.5 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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