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Series GSE48771 Query DataSets for GSE48771
Status Public on Nov 25, 2013
Title Spider mite responses to feeding on Col-0, myb28 myb29 cyp79b2 cyp79b3, and atr1D Arabidopsis plants
Organism Tetranychus urticae
Experiment type Expression profiling by array
Summary Our goal was to investigate the transcriptional response of T. urticae to different Arabidopsis plants with varying levels of indole glucosinolates.
 
Overall design Bean is the ancestral host plant for the T. urticae strain used in this study. Adult female spider mites were transferred to the three Arabidopsis lines (Col-0, qKo, atr1D) or bean, and after 24 hours, the gene expression levels were analyzed.
12 samples were investigated; 4 biological replicates for three comparisons: QKO (qKo vs. Col-0), ATR1D (atr1D vs. Col-0), and COL-0 (Col-0 vs. bean).
 
Contributor(s) Zhurov V, Wybouw N, Van Leeuwen T, Grbic V
Citation(s) 24285850
Submission date Jul 10, 2013
Last update date Mar 03, 2014
Contact name Nicky Wybouw
Organization name University of Ghent
Department Department of Crop Protection
Street address Coupure Links 653
City Gent
ZIP/Postal code 9000
Country Belgium
 
Platforms (1)
GPL16890 Agilent-033850 Tetranychus urticae 63K array
Samples (12)
GSM1184364 QKO, rep1
GSM1184365 QKO, rep2
GSM1184366 QKO, rep3
Relations
BioProject PRJNA211592

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE48771_RAW.tar 72.4 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table

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