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Series GSE48545 Query DataSets for GSE48545
Status Public on Mar 20, 2014
Title Fate changes leading to multipotency of isolated mesenchymal cells [Expression: Population_vs_Clone]
Organism Mus musculus
Experiment type Expression profiling by array
Summary Mesenchymal populations include a fraction of cells exhibiting multipotency as well as others with limited differentiation range. It has been assumed that the mesenchymal cellular cascade is topped by a multipotent cell, which gives rise to progeny with diminishing differentiation potentials. Here we show that cultured mesenchymal cells, a priori exhibiting a limited differentiation potential, may gain new capacities and become multipotent following single cell isolation. These fate changes were accompanied by up-regulation of differentiation promoting genes, many of which also became H4K20me1 methylated. Early events in the process included TGFβ and Wnt modulation, and down-regulation of hypoxia signaling. Indeed, hypoxic conditions inhibited the observed cell changes. Overall, cell isolation from neighboring partners caused major molecular changes and particularly, a newly established epigenetic state. It is suggested that MSCs behave non-deterministically and non-hierarchically and should therefore be defined primarily by their capacity to undergo fate changes triggered by environmental cues.
 
Overall design The gene expression profile of MSC population was compared with one of its derived single cell clones
 
Contributor(s) Shoshani O, Leshkowitz D, Massalha H, Ravid O, Zipori D
Citation(s) 24715711
Submission date Jul 04, 2013
Last update date Mar 04, 2019
Contact name Ofer Shoshani
E-mail(s) ofsher@hotmail.com
Organization name Ludwig Institute for Cancer Research
Lab Don Cleveland
Street address 9500 Gilman Drive
City La Jolla
State/province California
ZIP/Postal code 92093
Country USA
 
Platforms (1)
GPL6246 [MoGene-1_0-st] Affymetrix Mouse Gene 1.0 ST Array [transcript (gene) version]
Samples (6)
GSM1180589 MSC21 sample 1
GSM1180590 MSC21 sample 2
GSM1180591 MSC21 sample 3
This SubSeries is part of SuperSeries:
GSE48547 Fate changes leading to multipotency of isolated mesenchymal cells
Relations
BioProject PRJNA210557

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE48545_RAW.tar 24.6 Mb (http)(custom) TAR (of CEL)
GSE48545_population_clone_fold_chg.txt.gz 1.2 Mb (ftp)(http) TXT
Processed data included within Sample table

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