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Series GSE48143 Query DataSets for GSE48143
Status Public on Aug 31, 2013
Title Expression analysis of Lactococcus lactis NIAI712 and its plasmid cured variant
Platform organism Lactococcus lactis
Sample organism Lactococcus cremoris
Experiment type Expression profiling by array
Summary L. lactis NIAI712 carries five different plasmids, including an 8.7-kb plasmid designated pAG6. In this study, genome-wide expression profiles of the pAG6-cured variant was compared to the wild-type strain.
 
Overall design Two samples of total RNA recovered from a wild-type culture of L. lactis NIAI712 and a pAG6-cured variant were examined
 
Contributor(s) Kobayashi M
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Submission date Jun 20, 2013
Last update date Sep 01, 2013
Contact name Miho Kobayashi
E-mail(s) mihokoba@affrc.go.jp
Phone +81-29-838-8685
Organization name National Institute of Livestock and Grassland Science
Department Animal Products Research
Street address 2 Ikenodai
City Tsukuba
ZIP/Postal code 300-0901
Country Japan
 
Platforms (1)
GPL17320 Lactococcus lactis IL1403 and lactococcal plasmids 2.5K
Samples (2)
GSM1169700 Lactococcus lactis NIAI712
GSM1169701 L. lactis 712d
Relations
BioProject PRJNA208997

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE48143_RAW.tar 12.5 Mb (http)(custom) TAR (of CALLS, PAIR)
Processed data included within Sample table
Processed data provided as supplementary file

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