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Series GSE47641 Query DataSets for GSE47641
Status Public on Jul 16, 2013
Title Expression analysis of mock- or RAD21-transduced Kasumi1 cells
Organism Homo sapiens
Experiment type Expression profiling by array
Summary We recently identified recurrent mutations of cohesin complex in myeloid neoplasms through whole-exome sequencing analysis. RAD21 is one of the main components of the cohesin complex.
In this study, to investigate the biological impact of wild-type RAD21 on Kasumi1 cells harboring RAD21 mutation, Kasumi1 cells were retrovirally transduced with either mock or wild-type RAD21, and expression array was performed.
 
Overall design Expression analysis was performed for mock- or wild-type RAD21-transduced Kasumi-1 cells in triplicate. The experiment was performed twice independently.
 
Contributor(s) Kon A, Sanada M, Sato-Otsubo A, Yoshida K, Nagata Y, Sato Y, Ogawa S
Citation(s) 23955599
Submission date Jun 04, 2013
Last update date Mar 25, 2019
Contact name Ayana Kon
E-mail(s) akon-tky@umin.ac.jp
Organization name The University of Tokyo
Department Cancer Genomics Project
Street address Hongo 7-3-1, Bunkyo-ku
City Tokyo
ZIP/Postal code 113-8655
Country Japan
 
Platforms (1)
GPL570 [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array
Samples (12)
GSM1153923 Kasumi1_Mock_Exp1_rep1
GSM1153924 Kasumi1_Mock_Exp1_rep2
GSM1153925 Kasumi1_Mock_Exp1_rep3
This SubSeries is part of SuperSeries:
GSE47684 Recurrent mutations of multiple components of cohesin complex in myeloid neoplasms
Relations
BioProject PRJNA207003

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE47641_RAW.tar 97.4 Mb (http)(custom) TAR (of CEL, DCP)
Processed data included within Sample table
Processed data provided as supplementary file

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