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| Status |
Public on May 14, 2014 |
| Title |
3' RNA-Seq (3'SEQ) analysis gene expression profiling at G1-S transition in human embryonic stem cells (hESCs) and hESC-derived endoderm cells |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
In this report, we examine transcripts on a genome-wide level between the synchronized cell cycles of hESCs and hESC-derived endoderm cells. We found 10347, 10299 and 10362 genes expressed in the G1, G1/S, and S phase of hESCs, respectively; 10333, 10227 and 10215 genes expressed at the G1, G1/S and S phase of derived endoderm. We compared the transcriptome between these data sets and identified genes with differentiated phase expression between hESCs and hESC-derived endoderm cells.
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| |
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| Overall design |
Examination of the transcriptome at the G1-S transition in hESCs compared to hESC-derived endoderm cells.
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| |
|
| Contributor(s) |
Zhu H, Chuong E, Baker J |
| Citation missing |
Has this study been published? Please login to update or notify GEO. |
| |
| Submission date |
May 20, 2013 |
| Last update date |
May 15, 2019 |
| Contact name |
Edward Chuong |
| E-mail(s) |
edward.chuong@colorado.edu
|
| Organization name |
University of Colorado Boulder
|
| Department |
BioFrontiers
|
| Lab |
Chuong
|
| Street address |
596 UCB
|
| City |
Boulder |
| ZIP/Postal code |
80304 |
| Country |
USA |
| |
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| Platforms (1) |
| GPL10999 |
Illumina Genome Analyzer IIx (Homo sapiens) |
|
| Samples (6)
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| Relations |
| BioProject |
PRJNA203662 |
| SRA |
SRP022920 |
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