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Series GSE46730 Query DataSets for GSE46730
Status Public on Feb 03, 2014
Title Transcriptome Analysis of LincRNA TUNA Knockdown in Mouse Embryonic Stem Cells
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Globel gene expression was analyzed by RNA-seq to study the role of lincRNA TUNA in pluripotent mouse embryonic stem cells.
Overall design mRNA profiles of CCE mES cells with shRNA-mediated depletion of lincRNA TUNA on days 2, 4, and 6, compared to a control shRNA.
Contributor(s) Lin N, Rana TM
Citation(s) 24530304
Submission date May 08, 2013
Last update date May 15, 2019
Contact name xiayu huang
Organization name Sanford|Burnham Medical Research Institute
Street address 3010 Science Park Road
City San Diego
State/province CA
ZIP/Postal code 92037
Country USA
Platforms (1)
GPL13112 Illumina HiSeq 2000 (Mus musculus)
Samples (12)
GSM1136263 shControl_rep1
GSM1136264 shControl_rep2
GSM1136265 shControl_rep3
BioProject PRJNA202203
SRA SRP022177

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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE46730_RNA-seq-Nianwei.txt.gz 548.1 Kb (ftp)(http) TXT
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Processed data are available on Series record

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