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Series GSE45725 Query DataSets for GSE45725
Status Public on Jun 19, 2014
Title Internal validation cohort of breast cancers for development of ClinicoMolecular Triad Classification
Organism Homo sapiens
Experiment type Expression profiling by array
Summary In our early study (PMID: 21939527), we have created a ClinicoMolecular Triad Classification (CMTC) to improve prediction and prognostication of breast cancer by using a training cohort contained 161 breast cancer patients (2003 to 2008). Here, a supplemental internal validation cohort contained 340 breast cancer patients was collected (2008 to 2010) for development of the CMTC.
 
Overall design Total 340 fine-needle aspirates (FNA) specimens from breast tumors without replicate were collected and prepared for microarray examination. Finally, 284 invasive breast cancers were used in this study.

The training dataset of 161 breast tumors can be found at GEO Accession: GSE16987.
 
Contributor(s) Wang DY, Leong WL
Citation(s) 24996446
Submission date Apr 03, 2013
Last update date Mar 20, 2017
Contact name Dong-Yu Wang
Organization name UHN-PMH-OCI
Street address 610 University Ave
City Toronto
ZIP/Postal code M5G 2M9
Country Canada
 
Platforms (1)
GPL6883 Illumina HumanRef-8 v3.0 expression beadchip
Samples (340)
GSM1112901 Breast tumor 162
GSM1112902 Breast tumor 163
GSM1112903 Breast tumor 164
Relations
BioProject PRJNA196133

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE45725_340BC_no_normalization_Matrix.txt.gz 93.1 Mb (ftp)(http) TXT
GSE45725_RAW.tar 3.9 Mb (http)(custom) TAR
Processed data included within Sample table

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