GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
Series GSE44229 Query DataSets for GSE44229
Status Public on Mar 24, 2013
Title The Neuron-specific chromatin regulatory subunit BAF53b is necessary for synaptic plasticity and memory.
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary We performed an RNA Sequencing experiment on dorsal hippocampal tissue from four groups of animals: Baf53b+/- homecage (Baf53b+/- HC); Baf53b+/- behavior (Baf53b+/- Beh); wildtype homecage (WT HC); and wildtype behavior (WT Beh). Homecage animals were sacrificed directly from the animal's cage. Behavior animals were sacrificed thirty minutes following Object Location Memory training. The objective of this study was to examine activity regulated gene expression following a learning event (HC vs Beh) in wildtype and Baf53b+/- mutant mice.
Overall design Examination of gene expression following a learning event in wildtype and Baf53b+/- mutant mice in dorsal hippocampus.
Contributor(s) Vogel-Ciernia A, Wood MA, Magnan C, Baldi P
Citation(s) 23525042
Submission date Feb 11, 2013
Last update date Aug 19, 2019
Contact name Annie Vogel Ciernia
Phone 6048270752
Organization name University of British Columbia
Street address 2215 Wesbrook Mall room 4550, Centre for Brain Health
City Vancouver
State/province British Columbia
ZIP/Postal code V6T 2A1
Country Canada
Platforms (1)
GPL13112 Illumina HiSeq 2000 (Mus musculus)
Samples (24)
GSM1081063 Baf53b+/- Behavior - Replicate 2409
GSM1081064 Baf53b+/- Behavior - Replicate 2410
GSM1081065 Baf53b+/- Behavior - Replicate 2414
BioProject PRJNA189208
SRA SRP018555

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE44229_Differential_Analysis.xls.gz 550.3 Kb (ftp)(http) XLS
GSE44229_RPKM_Values.txt.gz 1.8 Mb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap