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| Status |
Public on Jan 26, 2013 |
| Title |
Differentially expressed genes in human hippocampus and Tera-1 cell line versus HepG2, A549, NT2/D1 and NGP127 cells. |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by array
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| Summary |
We discovered a new tissue specific enhancer originated from the human spesific endogenous retrovirus (hsERV). This enhancer displayed its activity in hippocampus and Tera-1 cell line as opposed to HepG2, A549, NT2/D1 and NGP127 cells. The aim of this study was to find transcription factors responsible for the hsERV enhancer activity. So we attempted to identify a fraction of transcription factor genes that were upregulated in enhancer-positive cells.
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| Overall design |
Total RNA obtained from human hippocampus and Tera-1, HepG2, A549, NT2/D1 and NGP127 cell lines.
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| Contributor(s) |
Suntsova MV, Buzdin AA |
| Citation(s) |
24218577 |
| Submission date |
Jan 25, 2013 |
| Last update date |
Aug 13, 2018 |
| Contact name |
Maria Vladimirovna Suntsova |
| E-mail(s) |
suntsova86@mail.ru
|
| Phone |
+79261076626
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| Fax |
+7 (495) 330-65-38
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| Organization name |
M.M. Shemyakin and Yu.A. Ovchinnikov Institute of bioorganic chemistry of the Russian Academy of Sciences
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| Department |
Department of Genetics and Postgenomic Technologies
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| Lab |
Group for Genomic Regulation of Cell Signaling Systems
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| Street address |
Miklukho-Maklaya, 16/10
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| City |
Moscow |
| ZIP/Postal code |
117997 |
| Country |
Russia |
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| Platforms (1) |
| GPL10558 |
Illumina HumanHT-12 V4.0 expression beadchip |
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| Samples (6)
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| Relations |
| BioProject |
PRJNA187374 |
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