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Series GSE43631 Query DataSets for GSE43631
Status Public on Jul 12, 2014
Title next generation sequencing facilitates quantitative analysis of control and TKO liver transcriptomes
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary We used RNAseq to analyse the transcriptomes of cycling and quiescent livers from cTKO (Rblox/lox;p130lox/lox;p107–/–) and control mice.
Overall design mRNA profiles of cycling and quiescent control and TKO liver tissue were generated by deep sequencing in duplicate
Contributor(s) Sage J, Ehmer U, Vaka D
Citation(s) 25017070
Submission date Jan 18, 2013
Last update date May 15, 2019
Contact name Julien Sage
Phone (650) 723-5113
Organization name Stanford University
Department Pediatrics
Lab Sage
Street address 265 Campus Drive, SIM1 G2078
City Stanford
State/province CA
ZIP/Postal code 94305-5457
Country USA
Platforms (1)
GPL13112 Illumina HiSeq 2000 (Mus musculus)
Samples (8)
GSM1067318 control cycling 1
GSM1067319 control cycling 2
GSM1067320 control quiescent 1
SRA SRP018038
BioProject PRJNA186957

Download family Format
SOFT formatted family file(s) SOFTHelp
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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE43631_RAW.tar 31.2 Mb (http)(custom) TAR (of FPKM_TRACKING)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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