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Series GSE40896 Query DataSets for GSE40896
Status Public on Oct 21, 2012
Title Genome-wide nucleosome positioning during embryonic stem cell development
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Contributor(s) Teif VB, Vainshtein Y, Caudron-Herger M, Mallm J, Marth C, Höfer T, Rippe K
Citation(s) 23085715
Submission date Sep 14, 2012
Last update date May 15, 2019
Contact name Vladimir B Teif
E-mail(s) vteif@essex.ac.uk
Organization name University of Essex
Department School of Life Sciences
Street address Wivenhoe Park
City Colchester
ZIP/Postal code CO4 3SQ
Country United Kingdom
 
Platforms (2)
GPL11002 Illumina Genome Analyzer IIx (Mus musculus)
GPL13112 Illumina HiSeq 2000 (Mus musculus)
Samples (11)
GSM1004652 NPC merged mononucleosomes
GSM1004653 ESC merged mononucleosomes
GSM1004654 MEF merged mononucleosomes
This SuperSeries is composed of the following SubSeries:
GSE40910 Genome-wide nucleosome positioning during embryonic stem cell development [MNase-Seq]
GSE40948 Genome-wide nucleosome positioning during embryonic stem cell development [RNA-Seq]
GSE40951 Genome-wide nucleosome positioning during embryonic stem cell development [ChIP-Seq]
Relations
BioProject PRJNA175500

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE40896_RAW.tar 10.1 Gb (http)(custom) TAR (of BED)
SRA Run SelectorHelp

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