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Series GSE39803 Query DataSets for GSE39803
Status Public on Jul 23, 2015
Title Mouse bone marrow cells transfected with mmu-miR-142-3p mimic oligo.
Organism Mus musculus
Experiment type Expression profiling by array
Summary Tumor progression is accompanied by an altered myelopoiesis that causes the accumulation of cells inhibiting anti-tumor T lymphocytes. We previously reported that immunosuppressive cells can be generated in vitro from bone marrow cells (BM) after four days GM-CSF and IL-6 treatment. Here, we describe that miR-142-3p down-regulation directs macrophage differentiation and determines the acquisition of their immunosuppressive function in cancer. Enforced miR over-expression impaired monocyte to macrophage transition both in vitro and in vivo. Conversely, forced miR down-regulation promoted the generation of immunosuppressive macrophages even during G-CSF-induced granulocytic differentiation. To identify how miR-142-3p regulates MDSC generation and activity, we analyze the gene expression of BM cultures transfected with either CTRL- or miR 142-3p mimic oligo -transfected before four days GM-CSF and IL-6 treatment.

Keywords: Expression profiling by array
 
Overall design BM cells were transfected either CTRL- or miR 142-3p mimic oligo before GM-CSF and IL-6 treatment to generate in vitro MDSCs during enforced miR over-expression. A triplicate of each sample was considered.Total RNA from obtained in vitro BM-differentiated MDSCs was isolated by Trizol reagent, and cRNA samples were hybridized to the Affymetrix GeneChip MOE430 2.0.
 
Contributor(s) Bronte V, Sonda N, Simonato F, Peranzoni E, Calì B, Wang E, Naldini L, Gentner B, Trautwein C, Molon B, Bortoluzzi S, Bisognin A
Citation(s) 23809164
Submission date Aug 01, 2012
Last update date Feb 11, 2019
Contact name Stefania Bortoluzzi
E-mail(s) stefania.bortoluzzi@unipd.it
Phone ++30 049 827 6502
Organization name University of Padova
Department Department of Molecular Medicine
Lab Computational Genomics
Street address via G. Colombo 3
City Padova
ZIP/Postal code 35131
Country Italy
 
Platforms (1)
GPL1261 [Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array
Samples (6)
GSM979508 m1
GSM979509 m3
GSM979510 m2
Relations
BioProject PRJNA171744

Download family Format
SOFT formatted family file(s) SOFTHelp
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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE39803_RAW.tar 14.9 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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