NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE36772 Query DataSets for GSE36772
Status Public on Mar 31, 2012
Title Expression data from primary breast tumors (NUH)
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Frozen tissue specimens from primary breast tumors were collected under approved protocols and profiled using Affymetrix U133 series expression microarrays. This cohort was assembled at the National University Hospital (NUH), Singapore in 2003, and profiled at the Genome Institute of Singapore, Microarray and Expression Genomics Lab. Dr. Lance D. Miller (Wake Forest University School of medicine) directed the profiling work.
A publication describing the generation of these data is not yet available. However, these data can be used alongside other Affymetrix breast tumour data sets to form large meta-cohorts for breast cancer research, as was done in Lasham et. al. J Natl Cancer Inst. 2012 Jan 18;104(2):133-146.
 
Overall design Frozen tumor tissues comprising of >60% tumor cellularity were extracted for total RNA and hybridized on Affymetrix microarrays.
Clinical data was requested, but not provided by submitter
 
Contributor(s) Miller LD
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Mar 23, 2012
Last update date Aug 10, 2018
Contact name Cris Print
E-mail(s) c.print@auckland.ac.nz
Organization name Auckland University
Street address Grafton Campus, Park Rd
City Auckland
ZIP/Postal code 1
Country New Zealand
 
Platforms (1)
GPL96 [HG-U133A] Affymetrix Human Genome U133A Array
Samples (100)
GSM900693 surgically resected, primary breast tumor NUH_BT09_A
GSM900694 surgically resected, primary breast tumor NUH_BT1_A
GSM900695 surgically resected, primary breast tumor NUH_BT10_A
This SubSeries is part of SuperSeries:
GSE36774 Expression data from primary breast tumors
Relations
BioProject PRJNA156849

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE36772_RAW.tar 342.5 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap