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Series GSE36408 Query DataSets for GSE36408
Status Public on Sep 21, 2012
Title Gene expression profiling of the whole mouse brain using transcriptome tomography
Organism Mus musculus
Experiment type Expression profiling by array
Summary We developed a novel framework to assess comprehensive endogenous gene expression maps in a broad and isotropic 3D-anatomical context using a relatively small number of original data points: transcriptome tomography. Using this method, we produced a dataset of gene expression maps of the whole mouse brain, computationally reconstructed from fraction data.
Overall design A total of 61 fraction samples obtained with body axes-based slicing preparation conjugated with anatomical image acquisition were analysed. There are two sets of body axes-based preparation series: the S series, composed of 9 fractions/ C of 13 fractions/ H of 6 fractions , and the So series, composed of 10 fractions/ Co of 16 fractions/ Ho of 7 fractions.
Contributor(s) Okamura-Oho Y, Yokota H
Citation(s) 23028969
Submission date Mar 09, 2012
Last update date Jan 12, 2017
Contact name Yuko Okamura-Oho
Organization name RIKEN
Street address 2-1, Hirosawa
City Wako-shi
State/province Saitama
ZIP/Postal code 351-0198
Country Japan
Platforms (1)
GPL7202 Agilent-014868 Whole Mouse Genome Microarray 4x44K G4122F (Probe Name version)
Samples (61)
GSM892741 2nd fraction of S series slicing
GSM892742 3rd fraction of S series slicing
GSM892743 4th fraction of S series slicing
BioProject PRJNA153207

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE36408_RAW.tar 117.5 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table

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