|
Status |
Public on Mar 10, 2012 |
Title |
Comparison of expression microarray data and somatic mutation signature in primary HCC |
Organism |
Homo sapiens |
Experiment type |
Expression profiling by array
|
Summary |
Hepatocellular carcinoma (HCC) is the third leading cause of cancer-related death worldwide. We sequenced and analyzed the whole genomes of primary HCCs. To examine the influence of transcription-coupled repair (TCR) on somatic substitution patterns in HCC, we performed expression microarrays analysis and compared gene expression levels and the number of substitutions in 7 HCCs.
|
|
|
Overall design |
Seven primary HCC were analyzed and compared with somatic substituion numbers.
|
|
|
Citation(s) |
22634756 |
|
Submission date |
Mar 09, 2012 |
Last update date |
Oct 11, 2016 |
Contact name |
Tatsuhiro Shibata |
E-mail(s) |
tashibat@ncc.go.jp
|
Organization name |
National Cancer Center
|
Street address |
5-1-1, Tsukiji, Chuo-ku
|
City |
Tokyo |
ZIP/Postal code |
104-0045 |
Country |
Japan |
|
|
Platforms (1) |
GPL14550 |
Agilent-028004 SurePrint G3 Human GE 8x60K Microarray (Probe Name Version) |
|
Samples (7)
|
|
Relations |
BioProject |
PRJNA153277 |