|
| Status |
Public on Mar 20, 2012 |
| Title |
SNP array data from the Cancer Cell Line Encyclopedia (CCLE) |
| Organism |
Homo sapiens |
| Experiment type |
Genome variation profiling by SNP array
|
| Summary |
The Cancer Cell Line Encyclopedia (CCLE) project is a collaboration between the Broad Institute, the Novartis Institutes for Biomedical Research and the Genomics Novartis Foundation to conduct a detailed genetic and pharmacologic characterization of a large panel of human cancer models
It consists of a compilation of gene expression, chromosomal copy number, and massively parallel sequencing data from nearly 1,000 human cancer cell lines. All raw and processed data are available through an integrated portal on www.broadinstitute.org/ccle
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| |
|
| Overall design |
The final cell line collection spans 36 cancer types. Representation of cell lines for each cancer type was mainly driven by cancer mortality in the United States, as a surrogate of unmet medical need, as well as availability.
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| |
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| Citation(s) |
22460905 |
| |
| Submission date |
Feb 28, 2012 |
| Last update date |
Aug 17, 2016 |
| Contact name |
Nicolas Stransky |
| E-mail(s) |
stransky@broadinstitute.org
|
| URL |
http://www.broadinstitute.org/ccle
|
| Organization name |
Broad Institute
|
| Department |
Cancer Program
|
| Lab |
Levi Garraway
|
| Street address |
7 Cambridge center
|
| City |
Cambridge |
| State/province |
MA |
| ZIP/Postal code |
02118 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL15315 |
Affymetrix Genome-Wide Human SNP 6.0 Array |
|
| Samples (947)
|
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| This SubSeries is part of SuperSeries: |
| GSE36139 |
SNP and Expression data from the Cancer Cell Line Encyclopedia (CCLE) |
|
| Relations |
| BioProject |
PRJNA155797 |
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