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Series GSE3402 Query DataSets for GSE3402
Status Public on Oct 04, 2005
Title Thyroid hormone induced changes in Xenopus laevis tadpole brain
Platform organism Xenopus laevis
Sample organisms Xenopus laevis; unidentified
Experiment type Expression profiling by array
Summary Premetamorphic Xenopus laevis tadpoles brain ventricle cells respond to thyroid hormone by proliferation and subsequent differentiation. The goal of this experiment is to identify the genes involved in the TH-induced proliferation pathway in tadpole brain and compare it to TH-induced proliferation and differentiation program in tadpole limb. Xenopus tadpoles (NF54) were treated with 1 mM methimazole in 0.1 X MMR solution for 1 week to block the endogenous TH production and reduce the TH present in the system of the tadpole. They were then treated with 100 nM T3 in 1 mM methimazole and 0.1 x MMR for another 24h and 48h or without T3 for 48h (control group). Brains from the tadpoles were dissected at the end of the experiment.
Keywords: development or differentiation design,organism part comparison design,reference design,replicate design,time series design
 
Overall design Premetamorphic Xenopus laevis tadpoles brain ventricle cells respond to thyroid hormone by proliferation and subsequent differentiation. The goal of this experiment is to identify the genes involved in the TH-induced proliferation pathway in tadpole brain and compare it to TH-induced proliferation and differentiation program in tadpole limb. Xenopus tadpoles (NF54) were treated with 1 mM methimazole in 0.1 X MMR solution for 1 week to block the endogenous TH production and reduce the TH present in the system of the tadpole. They were then treated with 100 nM T3 in 1 mM methimazole and 0.1 x MMR for another 24h and 48h or without T3 for 48h (control group). Brains from the tadpoles were dissected at the end of the experiment.
 
Contributor(s) Das B, Cai L, Carter MG, Piao Y, Sharov AA, Ko MS, Brown DD
Citation(s) 16458881
Submission date Oct 03, 2005
Last update date Jan 18, 2013
Contact name Minoru S.H. Ko
E-mail(s) kom@mail.nih.gov
Phone 410-558-8359
Organization name NIH
Department National Institute on Aging
Lab Lab of Genetics
Street address 251 Bayview Blvd, Suite 100, 10C
City Baltimore
State/province MD
ZIP/Postal code 21224
Country USA
 
Platforms (1)
GPL2901 Carnegie Xenopus Laevis 22K Microarray v1.0 (60-mer Oligo)
Samples (9)
GSM76690 NF54-brain-untreated-1
GSM76691 NF54-brain-untreated-2
GSM76692 NF54-brain-untreated-3
Relations
BioProject PRJNA93535

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE3402_RAW.tar 191.7 Mb (http)(custom) TAR (of TIFF)

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