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Series GSE33277 Query DataSets for GSE33277
Status Public on Dec 31, 2011
Title Castration-Resistant Prostate Cancer (CRPC)
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Gene expression data from Agilent-014850 4x44K human expression array for CRPC Prostate Cancer study with Xenograph data.
Overall design RNA was isolated using the mirVana total RNA protocol (part #AM1560, Ambion, Austin, TX). RNA integrity was verified using a 2100 Bioanalyzer (part #G2938A) with nano chips (parts #5067-15101 and #G4411B; Agilent Technologies, Alto, CA). RNA concentrations were determined using a Nanodrop spectrophotometer (Thermo Scientific, Wilmington, DE). Tumor messenger RNA expression was assessed using a human whole-genome oligo TMA kit from Agilent (prod #G4112F) according to the manufacturer’s protocol and as described previously.

In the Characteristics field, we have the notation like "Pt Dxed in 2001; hormone Tx; chemo Tx 2002; HRPC by 2002". That means the patient was admitted in 2001, did hormone and chemo treatment in 2002, and HRPC 2002. They are standard prostate cancer treatments.
Contributor(s) Sircar K, Huang H
Citation(s) 22363599
Submission date Oct 27, 2011
Last update date Feb 22, 2018
Contact name Heng Huang
Phone 817-272-7287
Organization name University of Texas at Arlington
Department Computer Science and Engineering
Street address 500 UTA Blvd.
City Arlington
State/province TX
ZIP/Postal code 76019
Country USA
Platforms (1)
GPL4133 Agilent-014850 Whole Human Genome Microarray 4x44K G4112F (Feature Number version)
Samples (16)
GSM855422 Control1
GSM855423 Control2
GSM855424 Control3
BioProject PRJNA149075

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE33277_RAW.tar 251.8 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table
Processed data provided as supplementary file

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