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| Status |
Public on Apr 05, 2012 |
| Title |
OsMADS29 regulates the degradation of the nucellus and the nucellar projection during rice seed development |
| Organism |
Oryza sativa |
| Experiment type |
Expression profiling by array
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| Summary |
To identify the downstream genes of OsMADS29, a genome-wide analysis of the gene expression profiles in the nucellar projection cells of ZH11 and A-OsMADS29 was performed. Hybridization with the microarray and subsequent analysis showed that a total of 1318 genes displayed altered expression (at least 2-fold) under suppressed OsMADS29 expression. Among the altered genes, 492 were up-regulated, and 826 were down-regulated.
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| Overall design |
The ZH11 and A-OsMADS29 (line2 and line14) were growth in the same condition.Then maternal nucellar projection cells of their seeds at 3 DAF (day after flowering) were fixed and obtained by LCM (laser capture microdissection), and total RNA was extracted and amplified from two independent biological samples.
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| Contributor(s) |
Yin LL, Xue HW |
| Citation(s) |
22408076 |
| |
| Submission date |
Sep 06, 2011 |
| Last update date |
Jan 09, 2014 |
| Contact name |
linlin yin |
| Organization name |
SIPPE
|
| Street address |
300 fenglin road
|
| City |
shanghai |
| ZIP/Postal code |
200032 |
| Country |
China |
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| Platforms (1) |
| GPL8852 |
Agilent-015241 Rice Gene Expression 4x44K Microarray (Probe name version) |
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| Samples (6)
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| Relations |
| BioProject |
PRJNA145207 |
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