|
| Status |
Public on Nov 23, 2011 |
| Title |
Spider mite preliminary feeding experiment with mites reared on bean and two Arabidopsis thaliana accessions |
| Organism |
Tetranychus urticae |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
We sequenced messenger RNA from mixed stages of the two-spotted spider mite (Tetranychus urticae) reared on bean (Phaseolus vulgaris cv California Red Kidney; the laboratory host plant for mites) and two Arabidopsis thaliana accessions which were considered to either be susceptible (Kondara) or resistant (Bla-2) to mite feeding. This pilot experiment was conducted to assess gene expression differences of mites grown on sensitive versus resistant Arabidopsis accessions, as well as differences in mites feeding on different host species. The expression data was used for gene model validation of genes predicted by EuGene in the spider mite genome and to assess gene expression levels.
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| |
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| Overall design |
Examination of gene expression of spider mites reared on beans and two Arabidopsis accessions (Kondara and Bla-2).
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| |
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| Contributor(s) |
Clark RM, Osborne EJ |
| Citation(s) |
22113690, 23663308 |
| |
| Submission date |
Aug 18, 2011 |
| Last update date |
Sep 16, 2019 |
| Contact name |
Richard M Clark |
| Organization name |
University of Utah
|
| Department |
Department of Biology
|
| Lab |
Clark Laboratory
|
| Street address |
257 So. 1400 East, RM 204 SB
|
| City |
Salt Lake City |
| State/province |
Utah |
| ZIP/Postal code |
84112 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL14176 |
Illumina Genome Analyzer II (Tetranychus urticae) |
|
| Samples (6)
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| This SubSeries is part of SuperSeries: |
| GSE32342 |
The genome of Tetranychus urticae reveals herbivorous pest adaptations |
|
| Relations |
| SRA |
SRP007884 |
| BioProject |
PRJNA154987 |
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