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Series GSE30742 Query DataSets for GSE30742
Status Public on Jun 01, 2012
Title Transcription profile of primordium gut organs
Organism Mus musculus
Experiment type Expression profiling by array
Summary The mechanisms of gastrointestinal morphogenesis in mammals are not well understood. This is partly due to the lack of organ specific gene expression pattern in the gastrointestinal tract during development. The initiation of organ bud formation occurs at E9.5-E11.5 in mice. These primordia for the digestive organs, including esophagus, stomach, and intestine, protrude from a tube-like structured endoderm, and have their own distinct morphogenesis. Thus, using mouse embryos, we surveyed transcription of prospective these three regions at E11.5 during gastrointestinal morphogenesis. This early digestive organ specific transcription profile will be useful for understanding of the mechanisms of gastrointestinal development.
Overall design Mouse gut organs morphogenesis begin at E9.5-E11.5. The primordium esophagus, stomach, and intestine at E11.5 were dissected and analysed transcription profile.
Contributor(s) Noguchi TK
Citation(s) 22266179
Submission date Jul 18, 2011
Last update date Jan 12, 2017
Contact name Takaaki Noguchi-Suda
Phone 09061365802
Organization name University of Tsukuba
Department Graduate school of life and enviromental sciences
Lab Wang. Lab
Street address Tennoudai 1-1-1
City Tsukuba
State/province Ibaraki
ZIP/Postal code 305-0821
Country Japan
Platforms (1)
GPL7202 Agilent-014868 Whole Mouse Genome Microarray 4x44K G4122F (Probe Name version)
Samples (3)
GSM765327 esophagus_e11.5_rep1
GSM765328 stomach_e11.5_rep1
GSM765329 intestine_e11.5_rep1
BioProject PRJNA144113

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE30742_RAW.tar 6.5 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table

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