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Series GSE30722 Query DataSets for GSE30722
Status Public on Jul 06, 2012
Title Profiling proteome-scale antibody responses to M. tuberculosis proteins in TB suspect's sera
Platform organism Mycobacterium tuberculosis H37Rv
Sample organism Homo sapiens
Experiment type Protein profiling by protein array
Summary Human infection with Mycobacterium tuberculosis results in a continuum of ill-defined, clinical manifestations with stable latent M. tuberculosis infection (LTBI) and severe active disease at the ends. Identifying different states of infection is of importance to tuberculosis (TB) control since risk of developing active disease varies among different asymptomatic states while infectiousness varies among patients with different bacterial burden. We investigated changes in proteome-scale antibody responses during disease progression in a non-human primate model of tuberculosis. We probed M. tuberculosis proteome microarrays with serial sera collected from three infection-outcome groups (active, reactivation, and latent). We found that each infection outcome is associated with characteristic changes in the antibody levels and number of antigenic targets, which suggested an association between antibody responses and bacillary burden. Additional proteome-scale serological profiling of > 400 human TB suspects established that antibody responses are positively associated with bacterial load. Thus tuberculosis-specific antibody levels and number of antigenic targets increases with disease progression.
 
Overall design Serum samples collected from adult patients with suspected tuberculosis during a multi-site study was used to probe whole proteome microarrays. Subject recruitment was conducted under uniform protocols approved by the institutional ethics committee at each site. Final diagnosis of active TB was based on positive M. tuberculosis culture results. The active TB patients were further subdivided into smear-positive and negative disease based on results of Ziehl-Neelsen staining of sputum smears for acid fast bacilli. Active TB was excluded as a diagnosis (Non-TB Disease [NTBD] patients) based on having negative M. tuberculosis culture and smear results and on having an alternate diagnosis. All subjects were presumably negative for HIV infection given the very low incidence of HIV infection in the study sites. Sera from 169 TB and 242 NTBD patients were selected for microarray probing. The control sera (n = 14) which was used to generate negative control distribution for each protein were negative to latent M. tuberculosis infection, as indicated by negative results to tuberculin skin test.
 
Contributor(s) Gennaro ML
Citation(s) 22732925
Submission date Jul 15, 2011
Last update date Jul 06, 2012
Contact name Shajo Kunnath-Velayudhan
E-mail(s) shajo.kunnath@einstein.yu.edu
Phone 7184303226
Organization name Albert Einstein College of Medicine
Department Microbiology and Immunology
Lab Porcelli
Street address 1300 Morris Park Ave
City Bronx
State/province NY
ZIP/Postal code 10461
Country USA
 
Platforms (1)
GPL9790 Mycobacterium tuberculosis H37Rv proteome microarray
Samples (411)
GSM762268 serum Non-TB SD1001
GSM762269 serum Non-TB SD1004
GSM762270 serum Non-TB SD1007
This SubSeries is part of SuperSeries:
GSE31368 Profiling proteome-scale antibody responses to M. tuberculosis
Relations
BioProject PRJNA154691

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE30722_RAW.tar 73.0 Mb (http)(custom) TAR (of GPR)
Processed data included within Sample table

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