|
| Status |
Public on Sep 01, 2011 |
| Title |
Changes in the Staphylococcus aureus transcriptome during early adaptation to the lung |
| Organism |
Staphylococcus aureus |
| Experiment type |
Expression profiling by array
|
| Summary |
Microarray expression profiling of S. aureus lavaged from murine lungs after residence times between 30 minutes and 6 hours compared to post-exponential phase or early log phase growth in Luria-Betani broth.
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| |
|
| Overall design |
21 samples analyzed, all replicates are biological replicates (independent biological experiments): 8 replicates of the overnight culture used for intranasal inoculation, 4 each from lavage at 0.5 hours and 2.0 hours, 3 from lavage after 6 hours and 2 from growth in fresh LB for 30 minutes.
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| |
|
| Contributor(s) |
Chaffin DO, Taylor D, Skerrett SJ, Rubens CE |
| Citation(s) |
22876285 |
| |
| Submission date |
Jul 11, 2011 |
| Last update date |
Dec 21, 2012 |
| Contact name |
Donald O. Chaffin |
| E-mail(s) |
donald.chaffin@seattlechildrens.org
|
| Phone |
(206) 884-1974
|
| Organization name |
Seattle Children's Research Institute
|
| Street address |
1900 9th Ave.
|
| City |
Seattle |
| State/province |
WA |
| ZIP/Postal code |
98101 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL4047 |
Saur2a custom-made Affymetrix array |
|
| Samples (21)
|
|
| Relations |
| BioProject |
PRJNA144495 |
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