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| Status |
Public on Jul 23, 2012 |
| Title |
Molecular events during the early stage of callus induction |
| Organism |
Arabidopsis thaliana |
| Experiment type |
Expression profiling by array
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| Summary |
Profiling the transcriptome of the early stage of Arabidopsis callus induction
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| Overall design |
variable_1 = root explants
variable_2 = aerial organ explants
variable_3 = 0 h on callus inducing medium
variable_4 = 12 h on callus inducing medium
variable_5 = 24 h on callus inducing medium
variable_6 = 48 h on callus inducing medium
variable_7 = 96 h on callus inducing medium
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| Contributor(s) |
Xu C, Xu K, Fan M, Hu Y |
| Citation(s) |
22508267, 22664253 |
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| Submission date |
May 26, 2011 |
| Last update date |
Aug 15, 2018 |
| Contact name |
Chongyi XU |
| E-mail(s) |
chyxu1979@yahoo.com.cn
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| Organization name |
Institute of Botany, the Chinese Academy of Sciences
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| Department |
Center for signal transdution & metabolomics
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| Street address |
No.20 Nanxincun, Xiangshan
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| City |
beijing |
| State/province |
beijing |
| ZIP/Postal code |
100093 |
| Country |
China |
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| Platforms (1) |
| GPL198 |
[ATH1-121501] Affymetrix Arabidopsis ATH1 Genome Array |
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| Samples (30)
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| GSM731295 |
root explants, incubated on callus inducing medium, 0 h, replicate 1 |
| GSM731296 |
root explants, incubated on callus inducing medium, 0 h, replicate 2 |
| GSM731297 |
root explants, incubated on callus inducing medium, 0 h, replicate 3 |
| GSM731298 |
root explants, incubated on callus inducing medium, 12 h, replicate 1 |
| GSM731301 |
root explants, incubated on callus inducing medium, 12 h, replicate 2 |
| GSM731302 |
root explants, incubated on callus inducing medium, 12 h, replicate 3 |
| GSM731303 |
root explants, incubated on callus inducing medium, 24 h, replicate 1 |
| GSM731304 |
root explants, incubated on callus inducing medium, 24 h, replicate 2 |
| GSM731305 |
root explants, incubated on callus inducing medium, 24 h, replicate 3 |
| GSM731306 |
root explants, incubated on callus inducing medium, 48 h, replicate 1 |
| GSM731307 |
root explants, incubated on callus inducing medium, 48 h, replicate 2 |
| GSM731308 |
root explants, incubated on callus inducing medium, 48 h, replicate 3 |
| GSM731309 |
root explants, incubated on callus inducing medium, 96 h, replicate 1 |
| GSM731310 |
root explants, incubated on callus inducing medium, 96 h, replicate 2 |
| GSM731451 |
root explants, incubated on callus inducing medium, 96 h, replicate 3 |
| GSM731452 |
aerial organ explants, incubated on callus inducing medium, 0 h, replicate 1 |
| GSM731461 |
aerial organ explants, incubated on callus inducing medium, 0 h, replicate 2 |
| GSM731462 |
aerial organ explants, incubated on callus inducing medium, 0 h, replicate 3 |
| GSM731463 |
aerial organ explants, incubated on callus inducing medium, 12 h, replicate 1 |
| GSM731464 |
aerial organ explants, incubated on callus inducing medium, 12 h, replicate 2 |
| GSM731465 |
aerial organ explants, incubated on callus inducing medium, 12 h, replicate 3 |
| GSM731466 |
aerial organ explants, incubated on callus inducing medium, 24 h, replicate 1 |
| GSM731473 |
aerial organ explants, incubated on callus inducing medium, 24 h, replicate 2 |
| GSM731476 |
aerial organ explants, incubated on callus inducing medium, 24 h, replicate 3 |
| GSM731481 |
aerial organ explants, incubated on callus inducing medium, 48 h, replicate 1 |
| GSM731484 |
aerial organ explants, incubated on callus inducing medium, 48 h, replicate 2 |
| GSM731485 |
aerial organ explants, incubated on callus inducing medium, 48 h, replicate 3 |
| GSM731486 |
aerial organ explants, incubated on callus inducing medium, 96 h, replicate 1 |
| GSM731489 |
aerial organ explants, incubated on callus inducing medium, 96 h, replicate 2 |
| GSM731494 |
aerial organ explants, incubated on callus inducing medium, 96 h, replicate 3 |
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| Relations |
| Affiliated with |
GSE69995 |
| BioProject |
PRJNA141447 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE29543_RAW.tar |
79.1 Mb |
(http)(custom) |
TAR (of CEL) |
| Processed data included within Sample table |
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