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Series GSE29396 Query DataSets for GSE29396
Status Public on Oct 12, 2012
Title Remote ischemic preconditioning in on-pump coronary artery bypass graft surgery
Organism Homo sapiens
Experiment type Expression profiling by array
Summary In this placebo-controlled randomized controlled trial, we tested whether remote ischemic preconditioning (RIPC) elicited by four 5-minute cycles of 300 mmHg of cuff inflation/deflation of the lower limb would reduce myocardial necrosis in isoflurane-anesthetized patients undergoing on-pump coronary artery bypass graft surgery. Secondary outcomes were the perioperative release of the biomarkers NTproBNP, hsCRP, S100, atrial transcriptional profiles, and short- and long-term clinical outcomes. RIPC with concomitantly applied isoflurane did not affect the release of biomarkers or clinical outcome. NTproBNP release correlated with isoflurane- but not RIPC-induced transcriptional changes.
 
Overall design For eleven randomly selected patients from each group (RIPC/CTL=no RIPC) two atrial samples were collected, one at the time of cannulation (T1) and one fifteen min after releasing the cross clamp (T2). The samples were immediately frozen in liquid nitrogen and later used for RNA isolation and subsequent microarray hybridization. Gene-level analysis was performed. the results of exon-level analysis will be published separately (only preliminary results available so far).
 
Contributor(s) Lucchinetti E, Zaugg M
Citation(s) 22222469
Submission date May 19, 2011
Last update date Feb 18, 2019
Contact name Eliana Lucchinetti
Organization name University of Alberta
Street address HMRC 408
City Edmonton
ZIP/Postal code T6G 2R3
Country Canada
 
Platforms (1)
GPL5175 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [transcript (gene) version]
Samples (44)
GSM726884 heart_RIPC_patient15_T1
GSM726885 heart_RIPC_patient16_T1
GSM726886 heart_RIPC_patient20_T1
Relations
BioProject PRJNA140165

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE29396_RAW.tar 961.8 Mb (http)(custom) TAR (of CEL)
GSE29396_Transcript-IDs-BestMatch_U133_gene_symbol.txt.gz 1.6 Mb (ftp)(http) TXT
Processed data included within Sample table

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