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| Status |
Public on May 20, 2011 |
| Title |
Expression data for haploid Saccharomyces cerevisiae strains growing in a defined low glucose medium. |
| Platform organisms |
Schizosaccharomyces pombe; Saccharomyces cerevisiae |
| Sample organism |
Saccharomyces cerevisiae |
| Experiment type |
Expression profiling by array
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| Summary |
We used microarrays to assess differences in gene expression associated with single nucleotide polymorphisms occurred in three genes, PMA1, MDS3 and MKT1, as compared to a reference strain devoid of any mutations (Progenitor strain).
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| Overall design |
Haploid yeast strains carrying no evolved alleles (progenitor - reference strain) or different combinations of the studied evolved alleles (PMA1e, MDS3e and MKT1e) and devoid of all other evolved alleles were used. The following genotypes were studied: ancestral, MDS3e, MKT1e, MDS3e_MKT1e and PMA1e_MKT1e (2 replicates each). Cells of the studied strains were grown overnight on liquid yeast peptone dextrose (YPD) medium and used to inoculate defined low glucose medium.
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| Contributor(s) |
Parreiras LS, Kohn LM, Anderson JB |
| Citation(s) |
21856932 |
| Submission date |
May 17, 2011 |
| Last update date |
Feb 21, 2017 |
| Contact name |
Lucas Parreiras |
| Organization name |
University of Toronto
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| Department |
Cell and Systems Biology
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| Street address |
3359 Mississauga Road N.
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| City |
Mississauga |
| State/province |
Ontario |
| ZIP/Postal code |
L5L 1C6 |
| Country |
Canada |
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| Platforms (1) |
| GPL2529 |
[Yeast_2] Affymetrix Yeast Genome 2.0 Array |
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| Samples (10)
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| GSM725556 |
PMA1e MKT1e strain, biological rep1 |
| GSM725557 |
PMA1e MKT1e strain, biological rep2 |
| GSM725558 |
Progenitor strain, biological rep1 |
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| Relations |
| BioProject |
PRJNA140181 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE29353_RAW.tar |
10.8 Mb |
(http)(custom) |
TAR (of CEL, CHP) |
| Processed data included within Sample table |
| Processed data provided as supplementary file |
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