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Series GSE29270 Query DataSets for GSE29270
Status Public on Oct 25, 2011
Title Molecular Characterization of Breast Carcinoma Associate fibroblasts
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Normal breast fibroblasts, breast cancer associated fibroblasts, fibroblasts taken at least 2cm from cancer margins and femur-derived human mesenchymal stem cells were profiled for comparative purposes
 
Overall design Ex vivo cultured primary cells of different anatomical origin were expression profiled under low serum conditions: cancer-associated fibroblasts, fibroblasts from a distance of at least 2cm from the cancers' edge, fibroblasts from cancer-free breasts and mesenchymal stromal cells from the marrow of femurs. Biological Replicates= 46. Technical Replicates= 17
 
Contributor(s) Basik M, Hosein Al
Citation(s) 25884794
Submission date May 12, 2011
Last update date Jun 12, 2019
Contact name Mark Basik
E-mail(s) markbasik@gmail.com
Organization name Lady Davis Institute
Department Oncology
Street address 3755 Cote Ste Catherine
City Montreal
State/province QC
ZIP/Postal code H3T1E2
Country Canada
 
Platforms (1)
GPL4133 Agilent-014850 Whole Human Genome Microarray 4x44K G4112F (Feature Number version)
Samples (63)
GSM723386 (T38CAF) Cancer associated fibroblast biological replicate 1
GSM723387 (T38CPF) Counterpart fibroblast biological replicate 1
GSM723388 (T48CAF) Cancer associated fibroblast Technical Replicate 1
Relations
BioProject PRJNA139921

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE29270_RAW.tar 639.0 Mb (http)(custom) TAR (of TXT)
GSE29270_final_averaged_data.txt.gz 7.8 Mb (ftp)(http) TXT
GSE29270_readme.txt 527 b (ftp)(http) TXT
Processed data included within Sample table
Processed data are available on Series record
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