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| Status |
Public on Sep 30, 2024 |
| Title |
Next Generation Sequencing Facilitates Quantitative Analysis of BALB/C mice triple-negative breast cancer Transcriptomes |
| Organism |
Mus musculus |
| Experiment type |
Expression profiling by high throughput sequencing
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| Summary |
Next-generation sequencing (NGS) has revolutionized systems-based analysis of cellular pathways. The goals of this study are to compare NGS-derived tumor transcriptome profiling (RNA-seq) to microarray and quantitative reverse transcription polymerase chain reaction (qRT–PCR) methods and to evaluate protocols for optimal high-throughput data analysis
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| Overall design |
Tumor mRNA profiles of 9-week old BALB/C mice were generated by deep sequencing, in triplicate, using Illumina GAIIx.
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| Contributor(s) |
Song J, Wang H, Meng X |
| Citation missing |
Has this study been published? Please login to update or notify GEO. |
| |
| Submission date |
Sep 27, 2024 |
| Last update date |
Sep 30, 2024 |
| Contact name |
Jianwen Song |
| E-mail(s) |
1120240909@mail.nankai.edu.cn
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| Organization name |
Nankai Unversity
|
| Street address |
Jinnan District
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| City |
Tianjin |
| ZIP/Postal code |
300350 |
| Country |
China |
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| Platforms (1) |
| GPL24247 |
Illumina NovaSeq 6000 (Mus musculus) |
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| Samples (10)
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| Relations |
| BioProject |
PRJNA1166074 |
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